Figure 1 Central Dogma

Figure 2 Design of AIS-INMACA

Figure 3Interface

Figure 4Training Interface

Figure 5 Testing Interface

Figure 6 Predictive Accuracy for Protein Coding Regions

Figure 7 Predictive Accuracy for Promoter Regions

Figure 8 Exons Prediction

Figure 9 Exons Boundaries Reporting

Figure 10 Predictive Accuracy for Promoter Regions

Neighbourhood

111

 

110

101

 

100

011

010

001

000

Rule

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Next State

0

 

 

0

 

1

 

1

0

0

1

1

51

( Rule 51)

 

 

 

 

 

 

 

 

 

 

 

 

 

Next State

1

 

 

1

 

1

 

1

1

1

1

0

254

(Rule 254)

 

 

 

 

 

 

 

 

 

 

 

 

 

Table 1:Transition Function

SNO

Rule Number

General Representation

1.

1

q i-1 +qi + qi+1  

2.

3

q i-1 +qi

3.

17

qi + qi+1

4.

5

q i-1 + qi+1

5.

51

qi

6.

15

q i-1

7.

85

qi+1

8.

255

1

Table 2:Complemented Rules

SNO

Rule Number

General Representation

1.

254

q i-1 +qi + qi+1

2.

252

q i-1 +qi

3.

238

qi + qi+1

4.

250

q i-1 + qi+1

5.

204

qi

6.

240

q i-1

7.

170

qi+1

8.

0

0

Table 3:Non complemented Rules

Size of Data Set

Prediction Time of Integrated

 

Algorithm

5000

1064

6000

1389

10000

2002

20000

2545

Table 4:Execution Time for prediction of both protein and promoter regions.

Data Set
DNA Sequences

54
Human

108
Human

162
Human

252
Human

354
Human

TrainingSet Coding

21,203

7,452

3,520

2,201

1,003

TrainingSet
Non Coding

22,563

35,256

2,560

2,056

506

Testing Set Coding

22,569

21,023

16,564

3,002

689

Testing Set Non Coding

32,562

28,568

12,056

2,006

700

Table 5:Number of Data Sets Used